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ERX358064: 454 GS FLX Titanium sequencing
1 LS454 (454 GS FLX Titanium) run: 18,488 spots, 9.1M bases, 20.9Mb downloads

Submitted by: UVEG
Study: Partial random genome sequencing of Roseovarius sp. with taxonomic purposes.
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Shotgun genome sequencing was performed on strains Roseovarius sp. 4SM10, Roseovarius aestuarii CECT 7745 and Roseovarius nubinhibens CECT 7750 to support the description of Roseovarius sp. 4SM10 as a novel species (Roseovarius albus). Subsequent assembly produced 3.93 Mb (1934 contigs) for strain 4SM10, 0.51 Mb (921 contigs) for R. aestuarii CECT 7745 and 0.45 Mb (735 contigs) for R. nubinhibens CECT 7750. Analysis of assembled data on JSpecies (Richter and Rossello-Mora 2009) yielded low ANI values (ANIb 72.78–77.03 % and ANIm 86.31–88.07 %) in all cases, clearly indicating each of the three strains belongs to a separate genomic species.
Sample: Roseovarius aestuarii CECT 7745
SAMEA2274407 • ERS381802 • All experiments • All runs
Library:
Name: unspecified
Instrument: 454 GS FLX Titanium
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Spot descriptor:
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Runs: 1 run, 18,488 spots, 9.1M bases, 20.9Mb
Run# of Spots# of BasesSizePublished
ERR38581818,4889.1M20.9Mb2014-03-03

ID:
656180

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